Transcript: MIR155HG:4

Basic information

LNCipedia transcript ID: MIR155HG:4 
LNCipedia gene ID: MIR155HG
RefSeq ID: NR_001458
Location (hg38): chr21:25562145-25575168
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1474 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_001458; NR_001458.3
Alternative gene names: BIC; NCRNA00172; MIR155HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.1132 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR155HG:4 no no no no

Available literature

  1. Liu (2015), Altered expression of long non-coding RNAs during genotoxic stress-induced cell death in human glioma cells., J. Neurooncol.
  2. Elton (2013), Regulation of the MIR155 host gene in physiological and pathological processes., Gene
  3. Vargova (2011), MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia., Blood


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JAM2-2:4
4.0 MIR155HG:4
4.1 MIR155HG:4
5.0 MIR155HG:4
5.1 MIR155HG:4
5.2 MIR155HG:4