Transcript: MIR133A1HG:2

Basic information

LNCipedia transcript ID: MIR133A1HG:2 
HGNC Gene Symbol: MIR133A1HG    
HGNC Full Gene Name: MIR133A1 host gene
Ensembl Gene ID: ENSG00000265142
Ensembl Transcript ID: ENST00000581072
Location (hg38): chr18:21825487-21831406
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4226 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000581072.1; hsa-mir-133a-1.1-001; OTTHUMT00000445571.1; NONHSAT058587; ENST00000581072.5
Alternative gene names: ENSG00000265142.1; hsa-mir-133a-1; OTTHUMG00000179284.1; ENSG00000265142.2; MIR1-2; ENSG00000265142.6; MIR133A1HG; MIR1-2HG; ENSG00000265142.7; ENSG00000265142.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.1957 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR133A1HG:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABHD3-1:2
4.0 MIR133A1HG:2
4.1 MIR133A1HG:2
5.0 MIR133A1HG:2
5.1 MIR133A1HG:2
5.2 MIR133A1HG:2