Transcript: MIR124-2HG:5

Basic information

LNCipedia transcript ID: MIR124-2HG:5 
HGNC Gene Symbol: MIR124-2HG    
HGNC Full Gene Name: MIR124-2 host gene
Ensembl Gene ID: ENSG00000254377
Ensembl Transcript ID: ENST00000521441
Location (hg38): chr8:64373328-64383787
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2840 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521441.1; RP11-32K4.2-004; OTTHUMT00000378434.1; NONHSAT126957
Alternative gene names: ENSG00000254377.1; RP11-32K4.2; OTTHUMG00000164360.1; LINC00966; ENSG00000254377.5; MIR124-2HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.4163 non-coding 
CPAT coding probability 7.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR124-2HG:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BHLHE22-1:2
4.0 MIR124-2HG:5
4.1 MIR124-2HG:5
5.0 MIR124-2HG:5
5.1 MIR124-2HG:5
5.2 MIR124-2HG:5