Transcript: MIR1-1HG-AS1:29

Basic information

LNCipedia transcript ID: MIR1-1HG-AS1:29 
LNCipedia gene ID: MIR1-1HG-AS1
Location (hg38): chr20:62544313-62551543
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2993 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT080754
Alternative gene names: FLJ30313


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9398 non-coding 
CPAT coding probability 35.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR1-1HG-AS1:29 no no no no

Available literature

  1. Hu (2014), Identification of prostate cancer LncRNAs by RNA-Seq., Asian Pac. J. Cancer Prev.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GATA5-2:7
4.0 C20orf166-AS1:2
4.1 C20orf166-AS1:2
5.0 C20orf166-AS1:2
5.1 MIR1-1HG-AS1:4
5.2 MIR1-1HG-AS1:29