Transcript: MHENCR:25

Basic information

LNCipedia transcript ID: MHENCR:25 
LNCipedia gene ID: MHENCR
Location (hg38): chr20:63627332-63628809
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028269; NONHSAT080908
Alternative gene names: XLOC_013615; linc-RTEL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.6559 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MHENCR:25 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RTEL1.1-1:3
3.1 lnc-RTEL1.1-1:3
4.0 lnc-RTEL1.1-3:6
4.1 lnc-RTEL1.1-3:6
5.0 lnc-RTEL1.1-3:6
5.1 MHENCR:14
5.2 MHENCR:25