Transcript: MGAT3-AS1:2

Basic information

LNCipedia transcript ID: MGAT3-AS1:2 
LNCipedia gene ID: MGAT3-AS1
Location (hg38): chr22:39475860-39477308
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 745 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT086794
Alternative gene names: TapSAKI


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.7066 non-coding 
CPAT coding probability 4.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MGAT3-AS1:2 yes no no no

Available literature

  1. Lorenzen (2015), Circulating long noncoding RNATapSaki is a predictor of mortality in critically ill patients with acute kidney injury., Clin. Chem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS19BP1-1:2
4.0 MGAT3-AS1:2
4.1 MGAT3-AS1:2
5.0 MGAT3-AS1:2
5.1 MGAT3-AS1:2
5.2 MGAT3-AS1:2