Transcript: MESTIT1:2

Basic information

LNCipedia transcript ID: MESTIT1:2 
HGNC Gene Symbol: MESTIT1    
HGNC Full Gene Name: MEST intronic transcript 1, antisense RNA
Ensembl Gene ID: ENSG00000272701
Ensembl Transcript ID: ENST00000610046
Location (hg38): chr7:130486042-130491033
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4118 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610046.2
Alternative gene names: ENSG00000272701.2; MESTIT1; NCRNA00040; MEST-AS1; AC007938.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.64 non-coding 
CPAT coding probability 6.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MESTIT1:2 no no no no

Available literature

  1. Nakabayashi (2002), Identification and characterization of an imprinted antisense RNA (MESTIT1) in the human MEST locus on chromosome 7q32., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 MESTIT1:2
4.1 MESTIT1:2
5.0 MESTIT1:2
5.1 MESTIT1:2
5.2 MESTIT1:2