Transcript: MCPH1-AS1:7

Basic information

LNCipedia transcript ID: MCPH1-AS1:7 
LNCipedia gene ID: MCPH1-AS1
Ensembl Gene ID: ENSG00000271743
Ensembl Transcript ID: ENST00000607368
Location (hg38): chr8:6615604-6617198
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1595 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607368.1
Alternative gene names: ENSG00000271743.1; CTD-2541M15.3; ; AF287957.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.973 non-coding 
CPAT coding probability 12.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCPH1-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPT2-7:1
4.0 MCPH1-AS1:7
4.1 MCPH1-AS1:7
5.0 MCPH1-AS1:7
5.1 MCPH1-AS1:7
5.2 MCPH1-AS1:7