Transcript: MCPH1-AS1:2

Basic information

LNCipedia transcript ID: MCPH1-AS1:2 
LNCipedia gene ID: MCPH1-AS1
RefSeq ID: NR_125386
Location (hg38): chr8:6615603-6708209
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4132 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125386; NR_125386.1
Alternative gene names: ; MCPH1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.1566 non-coding 
CPAT coding probability 10.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCPH1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPT2-1:6
4.0 MCPH1-AS1:2
4.1 MCPH1-AS1:2
5.0 MCPH1-AS1:2
5.1 MCPH1-AS1:2
5.2 MCPH1-AS1:2