Transcript: MCPH1-AS1:10

Basic information

LNCipedia transcript ID: MCPH1-AS1:10 
LNCipedia gene ID: MCPH1-AS1
Location (hg38): chr8:6625851-6708216
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2361 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249898.3|ENCT00000432055.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.6683 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCPH1-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MCPH1-AS1:10
5.0 MCPH1-AS1:10
5.1 MCPH1-AS1:10
5.2 MCPH1-AS1:10