Transcript: MCM8-AS1:2

Basic information

LNCipedia transcript ID: MCM8-AS1:2 
LNCipedia gene ID: MCM8-AS1
RefSeq ID: NR_110101
Location (hg38): chr20:5990795-6005821
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1131 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110101; NR_110101.1
Alternative gene names: ; MCM8-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.6658 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCM8-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRN4-1:2
4.0 MCM8-AS1:2
4.1 MCM8-AS1:2
5.0 MCM8-AS1:2
5.1 MCM8-AS1:2
5.2 MCM8-AS1:2