Transcript: MCF2L-AS1:4

Basic information

LNCipedia transcript ID: MCF2L-AS1:4 
HGNC Gene Symbol: MCF2L-AS1    
HGNC Full Gene Name: MCF2L antisense RNA 1
Ensembl Gene ID: ENSG00000235280
Ensembl Transcript ID: ENST00000446789
Location (hg38): chr13:112967484-112968824
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 712 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446789.2
Alternative gene names: ENSG00000235280.2; MCF2L-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.4513 non-coding 
CPAT coding probability 69.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MCF2L-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCID2-3:3
4.0 MCF2L-AS1:4
4.1 MCF2L-AS1:4
5.0 MCF2L-AS1:4
5.1 MCF2L-AS1:4
5.2 MCF2L-AS1:4