Transcript: MCF2L-AS1:2

Basic information

LNCipedia transcript ID: MCF2L-AS1:2 
LNCipedia gene ID: MCF2L-AS1
Location (hg38): chr13:112964832-112969130
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4299 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA367:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.9251 non-coding 
CPAT coding probability 50.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MCF2L-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 MCF2L-AS1:2
4.1 MCF2L-AS1:2
5.0 MCF2L-AS1:2
5.1 MCF2L-AS1:2
5.2 MCF2L-AS1:2