Transcript: MATN1-AS1:7

Basic information

LNCipedia transcript ID: MATN1-AS1:7 
HGNC Gene Symbol: MATN1-AS1    
HGNC Full Gene Name: MATN1 antisense RNA 1
Ensembl Gene ID: ENSG00000186056
Ensembl Transcript ID: ENST00000443076
Location (hg38): chr1:30725720-30726364
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 454 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000443076.1; RP5-1166H10.2-004; OTTHUMT00000091338.1; NONHSAT002061
Alternative gene names: ENSG00000186056.4; RP5-1166H10.2; OTTHUMG00000003706.2; ENSG00000186056.5; MATN1-AS1; ENSG00000186056.9;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.0594 non-coding 
CPAT coding probability 30.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MATN1-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZCCHC17-4:4
4.0 MATN1-AS1:7
4.1 MATN1-AS1:7
5.0 MATN1-AS1:7
5.1 MATN1-AS1:7
5.2 MATN1-AS1:7