Transcript: MAL2-AS1:8

Basic information

LNCipedia transcript ID: MAL2-AS1:8 
HGNC Gene Symbol: MAL2-AS1    
HGNC Full Gene Name: MAL2 antisense RNA 1
Ensembl Gene ID: ENSG00000253972
Ensembl Transcript ID: ENST00000521048
Location (hg38): chr8:119223804-119246843
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 575 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521048; ENST00000521048.1; RP11-4K16.2-001; OTTHUMT00000381246.1; NONHSAT128430
Alternative gene names: ENSG00000253972; RP11-4K16.2; ENSG00000253972.1; OTTHUMG00000164978.1; ENSG00000253972.5; MAL2; MAL2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.2408 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAL2-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNFRSF11B-1:2
3.1 lnc-TNFRSF11B-2:3
4.0 lnc-TNFRSF11B-2:3
4.1 lnc-TNFRSF11B-2:3
5.0 lnc-TNFRSF11B-2:3
5.1 MAL2-AS1:3
5.2 MAL2-AS1:8