Transcript: MAL2-AS1:10

Basic information

LNCipedia transcript ID: MAL2-AS1:10 
HGNC Gene Symbol: MAL2-AS1    
HGNC Full Gene Name: MAL2 antisense RNA 1
Ensembl Gene ID: ENSG00000253972
Ensembl Transcript ID: ENST00000523307
Location (hg38): chr8:119215111-119246836
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 556 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523307; ENST00000523307.1; RP11-4K16.2-003; OTTHUMT00000381242.1; NONHSAT128426
Alternative gene names: ENSG00000253972; RP11-4K16.2; ENSG00000253972.1; OTTHUMG00000164978.1; ENSG00000253972.5; MAL2; MAL2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.9301 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAL2-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNFRSF11B-1:4
3.1 lnc-TNFRSF11B-2:4
4.0 lnc-TNFRSF11B-2:4
4.1 lnc-TNFRSF11B-2:4
5.0 lnc-TNFRSF11B-2:4
5.1 MAL2-AS1:5
5.2 MAL2-AS1:10