Transcript: MAFG-DT:18

Basic information

LNCipedia transcript ID: MAFG-DT:18 
LNCipedia gene ID: MAFG-DT
Location (hg38): chr17:81927955-81929884
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1235 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265688.1|FTMT26700033736.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -99.9711 non-coding 
CPAT coding probability 7.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAFG-DT:18 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MAFG-AS1:10
5.0 MAFG-AS1:10
5.1 MAFG-DT:8
5.2 MAFG-DT:18