Transcript: MACROD2-AS1:7

Basic information

LNCipedia transcript ID: MACROD2-AS1:7 
HGNC Gene Symbol: MACROD2-AS1    
HGNC Full Gene Name: MACROD2 antisense RNA 1
Ensembl Gene ID: ENSG00000235914
Ensembl Transcript ID: ENST00000455291
Location (hg38): chr20:14884253-14929486
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 663 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455291.1; MACROD2-AS1-001; OTTHUMT00000078091.1
Alternative gene names: ENSG00000235914.1; MACROD2-AS1; OTTHUMG00000031920.1; BA318C17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -272.8808 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MACROD2-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FLRT3-1:2
4.0 MACROD2-AS1:7
4.1 MACROD2-AS1:7
5.0 MACROD2-AS1:7
5.1 MACROD2-AS1:7
5.2 MACROD2-AS1:7