Transcript: LNCPRESS1:3

Basic information

LNCipedia transcript ID: LNCPRESS1:3 
HGNC Gene Symbol: LNCPRESS1    
HGNC Full Gene Name: lncRNA p53 regulated and ESC associated 1
Ensembl Gene ID: ENSG00000232301
Ensembl Transcript ID: ENST00000429254
Location (hg38): chr7:101299578-101301346
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 867 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000429254.2
Alternative gene names: ENSG00000232301.2; LNCPRESS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.6193 non-coding 
CPAT coding probability 26.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LNCPRESS1:3 no no no no

Available literature

  1. Jain (2016), LncPRESS1 Is a p53-Regulated LncRNA that Safeguards Pluripotency by Disrupting SIRT6-Mediated De-acetylation of Histone H3K56., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LNCPRESS1:3
5.1 LNCPRESS1:3
5.2 LNCPRESS1:3