Transcript: LMO7-AS1:1

Basic information

LNCipedia transcript ID: LMO7-AS1:1 
HGNC Gene Symbol: LMO7-AS1    
HGNC Full Gene Name: LMO7 antisense RNA 1
Ensembl Gene ID: ENSG00000261105
Ensembl Transcript ID: ENST00000568302
RefSeq ID: NR_120411
Location (hg38): chr13:75604700-75635994
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 549 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000568302.1; RP11-173B14.5-001; OTTHUMT00000420534.1; NONHSAT034362; NR_120411; ENST00000568302.5; NR_120411.1
Alternative gene names: ENSG00000261105.1; RP11-173B14.5; OTTHUMG00000172803.1; ENSG00000261105.5; LMO7-AS1; UCHL3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.8002 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMO7-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COMMD6-2:1
4.0 LMO7-AS1:1
4.1 LMO7-AS1:1
5.0 LMO7-AS1:1
5.1 LMO7-AS1:1
5.2 LMO7-AS1:1