Transcript: LIPC-AS1:5

Basic information

LNCipedia transcript ID: LIPC-AS1:5 
LNCipedia gene ID: LIPC-AS1
RefSeq ID: NR_120338
Location (hg38): chr15:58434901-58498735
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2220 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120338; NR_120338.1
Alternative gene names: LOC101928694


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.3692 non-coding 
CPAT coding probability 6.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPC-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALDH1A2-1:2
4.0 lnc-ALDH1A2-1:2
4.1 lnc-ALDH1A2-1:2
5.0 lnc-ALDH1A2-1:2
5.1 LIPC-AS1:3
5.2 LIPC-AS1:5