Transcript: LINC02596:9

Basic information

LNCipedia transcript ID: LINC02596:9 
LNCipedia gene ID: LINC02596
Location (hg38): chr1:21586486-21596257
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5877 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233431.1|MICT00000005112.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.3075 non-coding 
CPAT coding probability 98.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02596:9 yes no no no

Available literature

  1. Fei (2018), Identification of aberrantly expressed long non-coding RNAs in postmenopausal osteoporosis., Int. J. Mol. Med.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALPL-1:4
5.0 lnc-ALPL-1:4
5.1 LINC02596:5
5.2 LINC02596:9