Transcript: LINC02582:15

Basic information

LNCipedia transcript ID: LINC02582:15 
LNCipedia gene ID: LINC02582
Location (hg38): chr18:73348556-73354705
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6148 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_14230_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3233 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02582:15 no no no no

Available literature

  1. Xue (2017), A long non-coding RNA expression signature to predict survival of patients with colon adenocarcinoma., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMM21-4:7
4.0 lnc-TIMM21-4:7
4.1 lnc-TIMM21-4:7
5.0 lnc-TIMM21-4:7
5.1 LINC02582:8
5.2 LINC02582:15