Transcript: LINC02579:13

Basic information

LNCipedia transcript ID: LINC02579:13 
LNCipedia gene ID: LINC02579
Location (hg38): chr2:64609497-64613451
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1801 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233694.1|ENCT00000224696.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.4764 non-coding 
CPAT coding probability 6.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02579:13 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AFTPH-1:6
5.0 lnc-AFTPH-1:6
5.1 LINC02579:7
5.2 LINC02579:13