Transcript: LINC02577:25

Basic information

LNCipedia transcript ID: LINC02577:25 
HGNC Gene Symbol: LINC02577    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2577
Ensembl Gene ID: ENSG00000228742
Ensembl Transcript ID: ENST00000602761
Location (hg38): chr7:106777542-106782852
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3049 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT122664; ENST00000602761.1
Alternative gene names: ENSG00000228742.5; RP5-884M6.1; ENSG00000228742.9; AC002384.1; LINC02577


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.0472 non-coding 
CPAT coding probability 11.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02577:25 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIK3CG-2:6
4.0 lnc-PIK3CG-2:6
4.1 lnc-PIK3CG-2:6
5.0 lnc-PIK3CG-2:6
5.1 LINC02577:13
5.2 LINC02577:25