Transcript: LINC02577:23

Basic information

LNCipedia transcript ID: LINC02577:23 
LNCipedia gene ID: LINC02577
Location (hg38): chr7:106775912-106777926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014191; NONHSAT122662
Alternative gene names: XLOC_006200; linc-PIK3CG-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -214.8769 non-coding 
CPAT coding probability 3.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02577:23 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIK3CG-2:3
3.1 lnc-PIK3CG-2:3
4.0 lnc-PIK3CG-2:3
4.1 lnc-PIK3CG-2:3
5.0 lnc-PIK3CG-2:3
5.1 LINC02577:11
5.2 LINC02577:23