Transcript: LINC02577:17

Basic information

LNCipedia transcript ID: LINC02577:17 
LNCipedia gene ID: LINC02577
Location (hg38): chr7:106775018-106784853
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4387 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228742.5|MICT00000330832.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.5584 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02577:17 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIK3CG-2:9
5.0 lnc-PIK3CG-2:9
5.1 LINC02577:5
5.2 LINC02577:17