Transcript: LINC02546:9

Basic information

LNCipedia transcript ID: LINC02546:9 
LNCipedia gene ID: LINC02546
Location (hg38): chr11:29594920-29630692
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019875; NONHSAT018567
Alternative gene names: XLOC_009097; linc-FSHB-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -316.5375 non-coding 
CPAT coding probability 6.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02546:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FSHB-1:2
3.1 lnc-FSHB-2:2
4.0 lnc-FSHB-2:2
4.1 lnc-FSHB-2:2
5.0 lnc-FSHB-2:2
5.1 LINC02546:3
5.2 LINC02546:9