Transcript: LINC02539:2

Basic information

LNCipedia transcript ID: LINC02539:2 
HGNC Gene Symbol: LINC02539    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2539
Ensembl Gene ID: ENSG00000234956
Ensembl Transcript ID: ENST00000645996
Location (hg38): chr6:137730170-137792835
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 641 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645996.1
Alternative gene names: ENSG00000234956.6; LINC02539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.1036 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02539:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02539:2
5.1 LINC02539:2
5.2 LINC02539:2