Transcript: LINC02532:51

Basic information

LNCipedia transcript ID: LINC02532:51 
HGNC Gene Symbol: LINC02532    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2532
Ensembl Gene ID: ENSG00000235142
Ensembl Transcript ID: ENST00000602621
Location (hg38): chr6:106717452-106746004
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2232 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT114257; ENST00000602621.1; ENST00000602621.5
Alternative gene names: ENSG00000235142.3; RP1-60O19.1; ENSG00000235142.7; LINC02532


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.8068 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02532:51 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTN4IP1-2:16
4.0 lnc-RTN4IP1-2:16
4.1 lnc-RTN4IP1-2:16
5.0 lnc-RTN4IP1-2:16
5.1 LINC02532:24
5.2 LINC02532:51