Transcript: LINC02520:43

Basic information

LNCipedia transcript ID: LINC02520:43 
LNCipedia gene ID: LINC02520
Location (hg38): chr6:37550004-37550860
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: TCONS_00011300; ENST00000414875; NONHSAT112272
Alternative gene names: XLOC_005279; linc-ZFAND3-1; ENSG00000227920; RP1-153P14.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.2227 non-coding 
CPAT coding probability 23.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02520:43 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL353597.1-3:1
3.1 lnc-AL353597.1-3:2
4.0 lnc-AL353597.1-3:2
4.1 lnc-AL353597.1-1:22
5.0 lnc-AL353597.1-1:22
5.1 LINC02520:22
5.2 LINC02520:43