Transcript: LINC02515:5

Basic information

LNCipedia transcript ID: LINC02515:5 
HGNC Gene Symbol: LINC02515    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2515
Ensembl Gene ID: ENSG00000250620
Ensembl Transcript ID: ENST00000503677
Location (hg38): chr4:187413564-187415697
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 536 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000503677; ENST00000503677.1; RP11-91J3.3-001; OTTHUMT00000360095.1; NONHSAT147312
Alternative gene names: ENSG00000250620; RP11-91J3.3; ENSG00000250620.1; OTTHUMG00000160298.1; LINC02515


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.9224 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02515:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZFP42-5:1
3.1 lnc-ZFP42-5:1
4.0 lnc-ZFP42-5:1
4.1 lnc-ZFP42-5:1
5.0 lnc-ZFP42-5:1
5.1 LINC02515:3
5.2 LINC02515:5