Transcript: LINC02508:6

Basic information

LNCipedia transcript ID: LINC02508:6 
HGNC Gene Symbol: LINC02508    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2508
Ensembl Gene ID: ENSG00000251619
Ensembl Transcript ID: ENST00000504165
Location (hg38): chr4:188776657-188785511
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 426 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007702; ENST00000504165; ENST00000504165.1; RP11-756P10.5-001; OTTHUMT00000360252.1; NONHSAT099759
Alternative gene names: XLOC_003836; linc-FRG1-8; ENSG00000251619; RP11-756P10.5; ENSG00000251619.1; OTTHUMG00000160328.1; LINC02508


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -283.1129 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02508:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRIML1-5:2
3.1 lnc-TRIML1-5:2
4.0 lnc-TRIML1-5:2
4.1 lnc-TRIML1-5:2
5.0 lnc-TRIML1-5:2
5.1 LINC02508:3
5.2 LINC02508:6