Transcript: LINC02505:7

Basic information

LNCipedia transcript ID: LINC02505:7 
HGNC Gene Symbol: LINC02505    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2505
Ensembl Gene ID: ENSG00000248215
Ensembl Transcript ID: ENST00000515128
Location (hg38): chr4:36548884-36582730
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 756 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000515128; ENST00000515128.1; RP11-722M1.1-003; OTTHUMT00000365822.1; NONHSAT096008
Alternative gene names: ENSG00000248215; RP11-722M1.1; ENSG00000248215.1; OTTHUMG00000161702.1; ENSG00000248215.5; LINC02505


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -202.2411 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02505:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARAP2-1:3
3.1 lnc-ARAP2-3:3
4.0 lnc-ARAP2-3:3
4.1 lnc-ARAP2-3:3
5.0 lnc-ARAP2-3:3
5.1 LINC02505:4
5.2 LINC02505:7