Transcript: LINC02482:21

Basic information

LNCipedia transcript ID: LINC02482:21 
LNCipedia gene ID: LINC02482
Location (hg38): chr4:6670728-6673860
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 444 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008417; NONHSAT095008
Alternative gene names: XLOC_003870; linc-PPP2R2C-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 8.0745 non-coding 
CPAT coding probability 5.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02482:21 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRFAP1L1-2:1
3.1 lnc-MRFAP1L1-2:1
4.0 lnc-MRFAP1L1-2:1
4.1 lnc-MRFAP1L1-2:1
5.0 lnc-MRFAP1L1-2:1
5.1 LINC02482:10
5.2 LINC02482:21