Transcript: LINC02478:12

Basic information

LNCipedia transcript ID: LINC02478:12 
HGNC Gene Symbol: LINC02478    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2478
RefSeq ID: NR_103775
Location (hg38): chr2:160257719-160271895
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 504 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103775; NR_103775.1
Alternative gene names: LOC100505984


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -252.1164 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02478:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB6-1:2
4.0 lnc-ITGB6-1:2
4.1 lnc-ITGB6-1:2
5.0 lnc-ITGB6-1:2
5.1 LINC02478:3
5.2 LINC02478:12