Transcript: LINC02478:11

Basic information

LNCipedia transcript ID: LINC02478:11 
LNCipedia gene ID: LINC02478
Location (hg38): chr2:160257731-160272108
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 705 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT075133
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -252.1164 non-coding 
CPAT coding probability 7.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02478:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB6-1:1
4.0 lnc-ITGB6-1:1
4.1 lnc-ITGB6-1:1
5.0 lnc-ITGB6-1:1
5.1 LINC02478:2
5.2 LINC02478:11