Transcript: LINC02475:4

Basic information

LNCipedia transcript ID: LINC02475:4 
LNCipedia gene ID: LINC02475
RefSeq ID: NR_131959
Location (hg38): chr4:44016861-44022061
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2513 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131959.1
Alternative gene names: LVCAT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.4352 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02475:4 no no no no

Available literature

  1. Iyer (2015), The landscape of long noncoding RNAs in the human transcriptome., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02475:4
5.1 LINC02475:4
5.2 LINC02475:4