Transcript: LINC02462:3

Basic information

LNCipedia transcript ID: LINC02462:3 
HGNC Gene Symbol: LINC02462    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2462
Ensembl Gene ID: ENSG00000251291
Ensembl Transcript ID: ENST00000503009
Location (hg38): chr4:134423867-134457852
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007627; ENST00000503009; ENST00000503009.1; RP11-400D2.3-001; OTTHUMT00000365043.1; NONHSAT098360
Alternative gene names: XLOC_003693; linc-CCRN4L-18; ENSG00000251291; RP11-400D2.3; ENSG00000251291.1; OTTHUMG00000161469.1; LINC02462


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.2884 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02462:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCDH10-2:1
3.1 lnc-PCDH10-3:1
4.0 lnc-PCDH10-3:1
4.1 lnc-PCDH10-3:1
5.0 lnc-PCDH10-3:1
5.1 LINC02462:2
5.2 LINC02462:3