Transcript: LINC02456:9

Basic information

LNCipedia transcript ID: LINC02456:9 
LNCipedia gene ID: LINC02456
Location (hg38): chr12:102313576-102316161
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1060 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000509318; TCONS_00020235; NONHSAT030331
Alternative gene names: ENSG00000249232; XLOC_009855; linc-ASCL1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.7778 non-coding 
CPAT coding probability 11.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02456:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C12orf48-1:1
3.1 lnc-C12orf48-2:1
4.0 lnc-C12orf48-2:1
4.1 lnc-C12orf48-2:1
5.0 lnc-C12orf48-2:1
5.1 LINC02456:5
5.2 LINC02456:9