Transcript: LINC02437:4

Basic information

LNCipedia transcript ID: LINC02437:4 
HGNC Gene Symbol: LINC02437    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2437
Ensembl Gene ID: ENSG00000248517
Ensembl Transcript ID: ENST00000505053
Location (hg38): chr4:184988997-185005186
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 911 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007689; ENST00000505053; ENST00000505053.1; RP11-386B13.4-001; OTTHUMT00000361118.1; NONHSAT099590
Alternative gene names: XLOC_003812; linc-HELT-1; ENSG00000248517; RP11-386B13.4; ENSG00000248517.1; OTTHUMG00000160551.1; LINC02437


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.443 non-coding 
CPAT coding probability 37.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02437:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HELT-1:1
3.1 lnc-HELT-1:1
4.0 lnc-HELT-1:1
4.1 lnc-HELT-1:1
5.0 lnc-HELT-1:1
5.1 LINC02437:2
5.2 LINC02437:4