Transcript: LINC02428:27

Basic information

LNCipedia transcript ID: LINC02428:27 
LNCipedia gene ID: LINC02428
Location (hg38): chr4:103425066-103453757
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 390 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00008181
Alternative gene names: XLOC_003629; linc-TET2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.9258 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02428:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CISD2-3:6
3.1 lnc-CISD2-3:6
4.0 lnc-CISD2-3:6
4.1 lnc-CISD2-3:6
5.0 lnc-CISD2-3:6
5.1 LINC02428:12
5.2 LINC02428:27