Transcript: LINC02427:20

Basic information

LNCipedia transcript ID: LINC02427:20 
LNCipedia gene ID: LINC02427
Location (hg38): chr4:184475133-184485848
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 417 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009191; NONHSAT099546
Alternative gene names: XLOC_004206; linc-IRF2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.4467 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02427:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2-1:1
3.1 lnc-IRF2-1:1
4.0 lnc-IRF2-1:1
4.1 lnc-IRF2-1:1
5.0 lnc-IRF2-1:1
5.1 LINC02427:10
5.2 LINC02427:20