Transcript: LINC02399:5

Basic information

LNCipedia transcript ID: LINC02399:5 
LNCipedia gene ID: LINC02399
Location (hg38): chr12:89947694-89949792
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 377 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020510; NONHSAT029835
Alternative gene names: XLOC_009827; linc-CLLU1-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.0004 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02399:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMTC3-3:2
3.1 lnc-TMTC3-4:2
4.0 lnc-TMTC3-4:2
4.1 lnc-TMTC3-4:2
5.0 lnc-TMTC3-4:2
5.1 LINC02399:3
5.2 LINC02399:5