Transcript: LINC02383:4

Basic information

LNCipedia transcript ID: LINC02383:4 
HGNC Gene Symbol: LINC02383    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2383
Ensembl Gene ID: ENSG00000248143
Ensembl Transcript ID: ENST00000508563
Location (hg38): chr4:43457527-43492543
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007756; ENST00000508563; ENST00000508563.1; RP11-324J13.2-001; OTTHUMT00000360656.1; NONHSAT096209
Alternative gene names: XLOC_003940; linc-ATP8A1-1; ENSG00000248143; RP11-324J13.2; ENSG00000248143.1; OTTHUMG00000160455.1; LINC02383


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.9213 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02383:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCTD8-2:1
3.1 lnc-KCTD8-2:1
4.0 lnc-KCTD8-2:1
4.1 lnc-KCTD8-2:1
5.0 lnc-KCTD8-2:1
5.1 LINC02383:2
5.2 LINC02383:4