Transcript: LINC02382:6

Basic information

LNCipedia transcript ID: LINC02382:6 
HGNC Gene Symbol: LINC02382    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2382
Ensembl Gene ID: ENSG00000250968
Ensembl Transcript ID: ENST00000515840
Location (hg38): chr4:170742469-170743718
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 614 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007895; ENST00000515840; ENST00000515840.1; RP11-322J23.1-001; OTTHUMT00000362753.1; NONHSAT099190
Alternative gene names: XLOC_004157; linc-AADAT-8; ENSG00000250968; RP11-322J23.1; ENSG00000250968.1; OTTHUMG00000160872.1; LINC02382


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.6831 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02382:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AADAT-3:1
3.1 lnc-AADAT-3:1
4.0 lnc-AADAT-3:1
4.1 lnc-AADAT-3:1
5.0 lnc-AADAT-3:1
5.1 LINC02382:4
5.2 LINC02382:6