Transcript: LINC02350:9

Basic information

LNCipedia transcript ID: LINC02350:9 
LNCipedia gene ID: LINC02350
Ensembl Gene ID: ENSG00000255595
Ensembl Transcript ID: ENST00000539588
Location (hg38): chr12:126191378-126358629
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 787 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000539588.2
Alternative gene names: ENSG00000255595.3; AC007368.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.6474 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02350:9 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.
  2. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02350:9
5.1 LINC02350:9
5.2 LINC02350:9