Transcript: LINC02350:17

Basic information

LNCipedia transcript ID: LINC02350:17 
LNCipedia gene ID: LINC02350
Location (hg38): chr12:126191266-126337448
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 865 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255778.1|ENCT00000097296.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.1128 non-coding 
CPAT coding probability 18.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02350:17 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.
  2. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM132B-5:5
5.0 lnc-TMEM132B-5:5
5.1 LINC02350:7
5.2 LINC02350:17