Transcript: LINC02348:11

Basic information

LNCipedia transcript ID: LINC02348:11 
LNCipedia gene ID: LINC02348
Location (hg38): chr15:101609065-101614327
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1784 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024221; NONHSAT051195
Alternative gene names: XLOC_011616; linc-PCSK6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8565 non-coding 
CPAT coding probability 9.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02348:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TM2D3-1:1
3.1 lnc-TM2D3-1:1
4.0 lnc-TM2D3-1:1
4.1 lnc-TM2D3-1:1
5.0 lnc-TM2D3-1:1
5.1 LINC02348:4
5.2 LINC02348:11