Transcript: LINC02341:9

Basic information

LNCipedia transcript ID: LINC02341:9 
LNCipedia gene ID: LINC02341
Location (hg38): chr13:42437427-42485760
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021769; NONHSAT033433
Alternative gene names: XLOC_010364; linc-TNFSF11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -255.1138 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02341:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNFSF11-1:1
3.1 lnc-TNFSF11-1:1
4.0 lnc-AKAP11-5:2
4.1 lnc-AKAP11-5:2
5.0 lnc-AKAP11-5:2
5.1 LINC02341:5
5.2 LINC02341:9